Actual source code: ex15f.F90

      1: !
      2: !   Solves a linear system in parallel with KSP.  Also indicates
      3: !   use of a user-provided preconditioner.  Input parameters include:
      4: !      -user_defined_pc : Activate a user-defined preconditioner
      5: !
      6: !     -------------------------------------------------------------------------
      7: !
      8: !     Module contains diag needed by shell preconditioner
      9: !
     10: #include <petsc/finclude/petscksp.h>
     11: module ex15fmodule
     12:   use petscksp
     13:   implicit none
     14:   Vec diag

     16: contains

     18: !/***********************************************************************/
     19: !/*          Routines for a user-defined shell preconditioner           */
     20: !/***********************************************************************/

     22: !
     23: !   SampleShellPCSetUp - This routine sets up a user-defined
     24: !   preconditioner context.
     25: !
     26: !   Input Parameters:
     27: !   pc - preconditioner object
     28: !
     29: !   Output Parameter:
     30: !   ierr  - error code (nonzero if error has been detected)
     31: !
     32: !   Notes:
     33: !   In this example, we define the shell preconditioner to be Jacobi
     34: !   method.  Thus, here we create a work vector for storing the reciprocal
     35: !   of the diagonal of the matrix; this vector is then
     36: !   used within the routine SampleShellPCApply().
     37: !
     38:   subroutine SampleShellPCSetUp(pc, ierr)

     40:     PC pc
     41:     Mat pmat
     42:     PetscErrorCode, intent(out) :: ierr

     44:     PetscCallA(PCGetOperators(pc, PETSC_NULL_MAT, pmat, ierr))
     45:     PetscCallA(MatCreateVecs(pmat, diag, PETSC_NULL_VEC, ierr))
     46:     PetscCallA(MatGetDiagonal(pmat, diag, ierr))
     47:     PetscCallA(VecReciprocal(diag, ierr))

     49:   end

     51: ! -------------------------------------------------------------------
     52: !
     53: !   SampleShellPCApply - This routine demonstrates the use of a
     54: !   user-provided preconditioner.
     55: !
     56: !   Input Parameters:
     57: !   pc - preconditioner object
     58: !   x - input vector
     59: !
     60: !   Output Parameters:
     61: !   y - preconditioned vector
     62: !   ierr  - error code (nonzero if error has been detected)
     63: !
     64: !   Notes:
     65: !   This code implements the Jacobi preconditioner, merely as an
     66: !   example of working with a PCSHELL.  Note that the Jacobi method
     67: !   is already provided within PETSc.
     68: !
     69:   subroutine SampleShellPCApply(pc, x, y, ierr)
     70:     PC pc
     71:     Vec x, y
     72:     PetscErrorCode, intent(out) :: ierr

     74:     PetscCallA(VecPointwiseMult(y, x, diag, ierr))

     76:   end

     78: !/***********************************************************************/
     79: !/*          Routines for a user-defined shell preconditioner           */
     80: !/***********************************************************************/

     82: !
     83: !   SampleShellPCDestroy - This routine destroys (frees the memory of) any
     84: !      objects we made for the preconditioner
     85: !
     86: !   Input Parameters:
     87: !   pc - for this example we use the actual PC as our shell context
     88: !
     89: !   Output Parameter:
     90: !   ierr  - error code (nonzero if error has been detected)
     91: !

     93:   subroutine SampleShellPCDestroy(pc, ierr)
     94:     PC pc
     95:     PetscErrorCode, intent(out) :: ierr

     97: !  Normally we would recommend storing all the work data (like diag) in
     98: !  the context set with PCShellSetContext()

    100:     PetscCallA(VecDestroy(diag, ierr))

    102:   end

    104: end module

    106: program main
    107:   use ex15fmodule
    108:   implicit none

    110: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    111: !                   Variable declarations
    112: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    113: !
    114: !  Variables:
    115: !     ksp     - linear solver context
    116: !     ksp      - Krylov subspace method context
    117: !     pc       - preconditioner context
    118: !     x, b, u  - approx solution, right-hand side, exact solution vectors
    119: !     A        - matrix that defines linear system
    120: !     its      - iterations for convergence
    121: !     norm     - norm of solution error

    123:   Vec x, b, u
    124:   Mat A
    125:   PC pc
    126:   KSP ksp
    127:   PetscScalar v
    128:   PetscScalar, parameter :: one = 1.0, neg_one = -1.0
    129:   PetscReal norm
    130:   PetscReal, parameter :: tol = 1.e-7
    131:   PetscErrorCode ierr
    132:   PetscInt i, j, II, JJ, Istart, Iend, its
    133:   PetscInt m, n
    134:   PetscMPIInt rank
    135:   PetscBool user_defined_pc, flg

    137: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    138: !                 Beginning of program
    139: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

    141:   PetscCallA(PetscInitialize(ierr))

    143:   m = 8
    144:   PetscCallA(PetscOptionsGetInt(PETSC_NULL_OPTIONS, PETSC_NULL_CHARACTER, '-m', m, flg, ierr))
    145:   n = 7
    146:   PetscCallA(PetscOptionsGetInt(PETSC_NULL_OPTIONS, PETSC_NULL_CHARACTER, '-n', n, flg, ierr))
    147:   PetscCallMPIA(MPI_Comm_rank(PETSC_COMM_WORLD, rank, ierr))

    149: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    150: !      Compute the matrix and right-hand-side vector that define
    151: !      the linear system, Ax = b.
    152: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

    154: !  Create parallel matrix, specifying only its global dimensions.
    155: !  When using MatCreate(), the matrix format can be specified at
    156: !  runtime. Also, the parallel partitioning of the matrix is
    157: !  determined by PETSc at runtime.

    159:   PetscCallA(MatCreate(PETSC_COMM_WORLD, A, ierr))
    160:   PetscCallA(MatSetSizes(A, PETSC_DECIDE, PETSC_DECIDE, m*n, m*n, ierr))
    161:   PetscCallA(MatSetType(A, MATAIJ, ierr))
    162:   PetscCallA(MatSetFromOptions(A, ierr))
    163:   PetscCallA(MatMPIAIJSetPreallocation(A, 5_PETSC_INT_KIND, PETSC_NULL_INTEGER_ARRAY, 5_PETSC_INT_KIND, PETSC_NULL_INTEGER_ARRAY, ierr))
    164:   PetscCallA(MatSeqAIJSetPreallocation(A, 5_PETSC_INT_KIND, PETSC_NULL_INTEGER_ARRAY, ierr))

    166: !  Currently, all PETSc parallel matrix formats are partitioned by
    167: !  contiguous chunks of rows across the processors.  Determine which
    168: !  rows of the matrix are locally owned.

    170:   PetscCallA(MatGetOwnershipRange(A, Istart, Iend, ierr))

    172: !  Set matrix elements for the 2-D, five-point stencil in parallel.
    173: !   - Each processor needs to insert only elements that it owns
    174: !     locally (but any non-local elements will be sent to the
    175: !     appropriate processor during matrix assembly).
    176: !   - Always specify global row and columns of matrix entries.
    177: !   - Note that MatSetValues() uses 0-based row and column numbers
    178: !     in Fortran as well as in C.

    180:   do II = Istart, Iend - 1
    181:     v = -1.0
    182:     i = II/n
    183:     j = II - i*n
    184:     if (i > 0) then
    185:       JJ = II - n
    186:       PetscCallA(MatSetValues(A, 1_PETSC_INT_KIND, [II], 1_PETSC_INT_KIND, [JJ], [v], ADD_VALUES, ierr))
    187:     end if
    188:     if (i < m - 1) then
    189:       JJ = II + n
    190:       PetscCallA(MatSetValues(A, 1_PETSC_INT_KIND, [II], 1_PETSC_INT_KIND, [JJ], [v], ADD_VALUES, ierr))
    191:     end if
    192:     if (j > 0) then
    193:       JJ = II - 1
    194:       PetscCallA(MatSetValues(A, 1_PETSC_INT_KIND, [II], 1_PETSC_INT_KIND, [JJ], [v], ADD_VALUES, ierr))
    195:     end if
    196:     if (j < n - 1) then
    197:       JJ = II + 1
    198:       PetscCallA(MatSetValues(A, 1_PETSC_INT_KIND, [II], 1_PETSC_INT_KIND, [JJ], [v], ADD_VALUES, ierr))
    199:     end if
    200:     v = 4.0
    201:     PetscCallA(MatSetValues(A, 1_PETSC_INT_KIND, [II], 1_PETSC_INT_KIND, [II], [v], ADD_VALUES, ierr))
    202:   end do

    204: !  Assemble matrix, using the 2-step process:
    205: !       MatAssemblyBegin(), MatAssemblyEnd()
    206: !  Computations can be done while messages are in transition,
    207: !  by placing code between these two statements.

    209:   PetscCallA(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY, ierr))
    210:   PetscCallA(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY, ierr))

    212: !  Create parallel vectors.
    213: !   - Here, the parallel partitioning of the vector is determined by
    214: !     PETSc at runtime.  We could also specify the local dimensions
    215: !     if desired -- or use the more general routine VecCreate().
    216: !   - When solving a linear system, the vectors and matrices MUST
    217: !     be partitioned accordingly.  PETSc automatically generates
    218: !     appropriately partitioned matrices and vectors when MatCreate()
    219: !     and VecCreate() are used with the same communicator.
    220: !   - Note: We form 1 vector from scratch and then duplicate as needed.

    222:   PetscCallA(VecCreateFromOptions(PETSC_COMM_WORLD, PETSC_NULL_CHARACTER, 1_PETSC_INT_KIND, PETSC_DECIDE, m*n, u, ierr))
    223:   PetscCallA(VecDuplicate(u, b, ierr))
    224:   PetscCallA(VecDuplicate(b, x, ierr))

    226: !  Set exact solution; then compute right-hand-side vector.

    228:   PetscCallA(VecSet(u, one, ierr))
    229:   PetscCallA(MatMult(A, u, b, ierr))

    231: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    232: !         Create the linear solver and set various options
    233: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

    235: !  Create linear solver context

    237:   PetscCallA(KSPCreate(PETSC_COMM_WORLD, ksp, ierr))

    239: !  Set operators. Here the matrix that defines the linear system
    240: !  also serves as the matrix from which the preconditioner is constructed.

    242:   PetscCallA(KSPSetOperators(ksp, A, A, ierr))

    244: !  Set linear solver defaults for this problem (optional).
    245: !   - By extracting the KSP and PC contexts from the KSP context,
    246: !     we can then directly call any KSP and PC routines
    247: !     to set various options.

    249:   PetscCallA(KSPGetPC(ksp, pc, ierr))
    250:   PetscCallA(KSPSetTolerances(ksp, tol, PETSC_CURRENT_REAL, PETSC_CURRENT_REAL, PETSC_CURRENT_INTEGER, ierr))

    252: !
    253: !  Set a user-defined shell preconditioner if desired
    254: !
    255:   PetscCallA(PetscOptionsHasName(PETSC_NULL_OPTIONS, PETSC_NULL_CHARACTER, '-user_defined_pc', user_defined_pc, ierr))

    257:   if (user_defined_pc) then

    259: !  (Required) Indicate to PETSc that we are using a shell preconditioner
    260:     PetscCallA(PCSetType(pc, PCSHELL, ierr))

    262: !  (Required) Set the user-defined routine for applying the preconditioner
    263:     PetscCallA(PCShellSetApply(pc, SampleShellPCApply, ierr))

    265: !  (Optional) Do any setup required for the preconditioner
    266:     PetscCallA(PCShellSetSetUp(pc, SampleShellPCSetUp, ierr))

    268: !  (Optional) Frees any objects we created for the preconditioner
    269:     PetscCallA(PCShellSetDestroy(pc, SampleShellPCDestroy, ierr))

    271:   else
    272:     PetscCallA(PCSetType(pc, PCJACOBI, ierr))
    273:   end if

    275: !  Set runtime options, e.g.,
    276: !      -ksp_type <type> -pc_type <type> -ksp_monitor -ksp_rtol <rtol>
    277: !  These options will override those specified above as long as
    278: !  KSPSetFromOptions() is called _after_ any other customization
    279: !  routines.

    281:   PetscCallA(KSPSetFromOptions(ksp, ierr))

    283: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    284: !                      Solve the linear system
    285: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

    287:   PetscCallA(KSPSolve(ksp, b, x, ierr))

    289: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    290: !                     Check solution and clean up
    291: ! - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

    293: !  Check the error

    295:   PetscCallA(VecAXPY(x, neg_one, u, ierr))
    296:   PetscCallA(VecNorm(x, NORM_2, norm, ierr))
    297:   PetscCallA(KSPGetIterationNumber(ksp, its, ierr))

    299:   if (rank == 0) then
    300:     if (norm > 1.e-12) then
    301:       write (6, 100) norm, its
    302:     else
    303:       write (6, 110) its
    304:     end if
    305:   end if
    306: 100 format('Norm of error ', 1pe11.4, ' iterations ', i5)
    307: 110 format('Norm of error < 1.e-12,iterations ', i5)

    309: !  Free work space.  All PETSc objects should be destroyed when they
    310: !  are no longer needed.

    312:   PetscCallA(KSPDestroy(ksp, ierr))
    313:   PetscCallA(VecDestroy(u, ierr))
    314:   PetscCallA(VecDestroy(x, ierr))
    315:   PetscCallA(VecDestroy(b, ierr))
    316:   PetscCallA(MatDestroy(A, ierr))

    318: !  Always call PetscFinalize() before exiting a program.

    320:   PetscCallA(PetscFinalize(ierr))
    321: end program
    322: !
    323: !/*TEST
    324: !
    325: !   test:
    326: !      nsize: 2
    327: !      args: -ksp_view -user_defined_pc -ksp_gmres_cgs_refinement_type refine_always
    328: !
    329: !TEST*/