Actual source code: ex6.c

      1: static char help[] = "Writes an array to a file, then reads an array from a file, then forms a vector.\n\n";

      3: /*
      4:     This uses the low level PetscBinaryWrite() and PetscBinaryRead() to access a binary file. It will not work in parallel!

      6:     We HIGHLY recommend using instead VecView() and VecLoad() to read and write Vectors in binary format (which also work in parallel). Then you can use
      7:     share/petsc/matlab/PetscBinaryRead() and share/petsc/matlab/PetscBinaryWrite() to read (or write) the vector into MATLAB.

      9:     Note this also works for matrices with MatView() and MatLoad().
     10: */
     11: #include <petscvec.h>

     13: int main(int argc, char **args)
     14: {
     15:   PetscMPIInt  size;
     16:   int          fd;
     17:   PetscInt     i, m = 10, sz;
     18:   PetscScalar *avec, *array;
     19:   Vec          vec;
     20:   PetscViewer  view_out, view_in;

     22:   PetscFunctionBeginUser;
     23:   PetscCall(PetscInitialize(&argc, &args, NULL, help));
     24:   PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size));
     25:   PetscCheck(size == 1, PETSC_COMM_WORLD, PETSC_ERR_WRONG_MPI_SIZE, "This is a uniprocessor example only!");

     27:   PetscCall(PetscOptionsGetInt(NULL, NULL, "-m", &m, NULL));

     29:   /* ---------------------------------------------------------------------- */
     30:   /*          PART 1: Write some data to a file in binary format            */
     31:   /* ---------------------------------------------------------------------- */

     33:   /* Allocate array and set values */
     34:   PetscCall(PetscMalloc1(m, &array));
     35:   for (i = 0; i < m; i++) array[i] = i * 10.0;

     37:   /* Open viewer for binary output */
     38:   PetscCall(PetscViewerBinaryOpen(PETSC_COMM_SELF, "input.dat", FILE_MODE_WRITE, &view_out));
     39:   PetscCall(PetscViewerBinaryGetDescriptor(view_out, &fd));

     41:   /* Write binary output */
     42:   PetscCall(PetscBinaryWrite(fd, &m, 1, PETSC_INT));
     43:   PetscCall(PetscBinaryWrite(fd, array, m, PETSC_SCALAR));

     45:   /* Destroy the output viewer and work array */
     46:   PetscCall(PetscViewerDestroy(&view_out));
     47:   PetscCall(PetscFree(array));

     49:   /* ---------------------------------------------------------------------- */
     50:   /*          PART 2: Read data from file and form a vector                 */
     51:   /* ---------------------------------------------------------------------- */

     53:   /* Open input binary viewer */
     54:   PetscCall(PetscViewerBinaryOpen(PETSC_COMM_SELF, "input.dat", FILE_MODE_READ, &view_in));
     55:   PetscCall(PetscViewerBinaryGetDescriptor(view_in, &fd));

     57:   /* Create vector and get pointer to data space */
     58:   PetscCall(VecCreate(PETSC_COMM_SELF, &vec));
     59:   PetscCall(VecSetSizes(vec, PETSC_DECIDE, m));
     60:   PetscCall(VecSetFromOptions(vec));
     61:   PetscCall(VecGetArray(vec, &avec));

     63:   /* Read data into vector */
     64:   PetscCall(PetscBinaryRead(fd, &sz, 1, NULL, PETSC_INT));
     65:   PetscCheck(sz > 0, PETSC_COMM_SELF, PETSC_ERR_FILE_UNEXPECTED, "Error: Must have array length > 0");

     67:   PetscCall(PetscPrintf(PETSC_COMM_SELF, "reading data in binary from input.dat, sz =%" PetscInt_FMT " ...\n", sz));
     68:   PetscCall(PetscBinaryRead(fd, avec, sz, NULL, PETSC_SCALAR));

     70:   /* View vector */
     71:   PetscCall(VecRestoreArray(vec, &avec));
     72:   PetscCall(VecView(vec, PETSC_VIEWER_STDOUT_SELF));

     74:   /* Free data structures */
     75:   PetscCall(VecDestroy(&vec));
     76:   PetscCall(PetscViewerDestroy(&view_in));
     77:   PetscCall(PetscFinalize());
     78:   return 0;
     79: }

     81: /*TEST

     83:      test:

     85: TEST*/