Actual source code: pvecimpl.h

      1: #pragma once

      3: #include <../src/vec/vec/impls/dvecimpl.h>

      5: typedef struct {
      6:   PetscInt insertmode;
      7:   PetscInt count;
      8:   PetscInt bcount;
      9: } VecAssemblyHeader;

     11: typedef struct {
     12:   PetscInt    *ints;
     13:   PetscInt    *intb;
     14:   PetscScalar *scalars;
     15:   PetscScalar *scalarb;
     16:   char         pendings;
     17:   char         pendingb;
     18: } VecAssemblyFrame;

     20: typedef struct {
     21:   VECHEADER
     22:   PetscInt   nghost;      /* number of ghost points on this process */
     23:   IS         ghost;       /* global indices of ghost values */
     24:   Vec        localrep;    /* local representation of vector */
     25:   VecScatter localupdate; /* scatter to update ghost values */

     27:   PetscBool          assembly_subset;     /* Subsequent assemblies will set a subset (perhaps equal) of off-process entries set on first assembly */
     28:   PetscBool          first_assembly_done; /* Is the first time assembly done? */
     29:   PetscBool          use_status;          /* Use MPI_Status to determine number of items in each message */
     30:   PetscMPIInt        nsendranks;
     31:   PetscMPIInt        nrecvranks;
     32:   PetscMPIInt       *sendranks;
     33:   PetscMPIInt       *recvranks;
     34:   VecAssemblyHeader *sendhdr, *recvhdr;
     35:   VecAssemblyFrame  *sendptrs; /* pointers to the main messages */
     36:   MPI_Request       *sendreqs;
     37:   MPI_Request       *recvreqs;
     38:   PetscSegBuffer     segrecvint;
     39:   PetscSegBuffer     segrecvscalar;
     40:   PetscSegBuffer     segrecvframe;
     41: #if defined(PETSC_HAVE_NVSHMEM)
     42:   PetscBool use_nvshmem; /* Try to use NVSHMEM in communication of, for example, VecNorm */
     43: #endif

     45:   /* COO fields, assuming m is the vector's local size */
     46:   PetscCount  coo_n;
     47:   PetscCount  tot1;  /* Total local entries in COO arrays */
     48:   PetscCount *jmap1; /* [m+1]: i-th entry of the vector has jmap1[i+1]-jmap1[i] repeats in COO arrays */
     49:   PetscCount *perm1; /* [tot1]: permutation array for local entries */

     51:   PetscCount  nnz2;  /* Unique entries in recvbuf */
     52:   PetscCount *imap2; /* [nnz2]: i-th unique entry in recvbuf is imap2[i]-th entry in the vector */
     53:   PetscCount *jmap2; /* [nnz2+1] */
     54:   PetscCount *perm2; /* [recvlen] */

     56:   PetscSF      coo_sf;
     57:   PetscCount   sendlen, recvlen;  /* Lengths (in unit of PetscScalar) of send/recvbuf */
     58:   PetscCount  *Cperm;             /* [sendlen]: permutation array to fill sendbuf[]. 'C' for communication */
     59:   PetscScalar *sendbuf, *recvbuf; /* Buffers for remote values in VecSetValuesCOO() */
     60: } Vec_MPI;

     62: PETSC_INTERN PetscErrorCode VecMTDot_MPI(Vec, PetscInt, const Vec[], PetscScalar *);
     63: PETSC_INTERN PetscErrorCode VecView_MPI_Binary(Vec, PetscViewer);
     64: PETSC_INTERN PetscErrorCode VecView_MPI_Draw_LG(Vec, PetscViewer);
     65: PETSC_INTERN PetscErrorCode VecView_MPI_Socket(Vec, PetscViewer);
     66: PETSC_INTERN PetscErrorCode VecView_MPI_HDF5(Vec, PetscViewer);
     67: PETSC_INTERN PetscErrorCode VecView_MPI_ADIOS(Vec, PetscViewer);
     68: PETSC_INTERN PetscErrorCode VecGetSize_MPI(Vec, PetscInt *);
     69: PETSC_INTERN PetscErrorCode VecGetValues_MPI(Vec, PetscInt, const PetscInt[], PetscScalar[]);
     70: PETSC_INTERN PetscErrorCode VecSetValues_MPI(Vec, PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
     71: PETSC_INTERN PetscErrorCode VecSetValuesBlocked_MPI(Vec, PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
     72: PETSC_INTERN PetscErrorCode VecAssemblyBegin_MPI(Vec);
     73: PETSC_INTERN PetscErrorCode VecAssemblyEnd_MPI(Vec);
     74: PETSC_INTERN PetscErrorCode VecAssemblyReset_MPI(Vec);
     75: PETSC_EXTERN PetscErrorCode VecCreate_MPI(Vec);
     76: PETSC_INTERN PetscErrorCode VecMDot_MPI_GEMV(Vec, PetscInt, const Vec[], PetscScalar *);
     77: PETSC_INTERN PetscErrorCode VecMTDot_MPI_GEMV(Vec, PetscInt, const Vec[], PetscScalar *);

     79: PETSC_INTERN PetscErrorCode VecDuplicate_MPI(Vec, Vec *);
     80: PETSC_INTERN PetscErrorCode VecDuplicateWithArray_MPI(Vec, const PetscScalar *, Vec *);
     81: PETSC_INTERN PetscErrorCode VecSetPreallocationCOO_MPI(Vec, PetscCount, const PetscInt[]);
     82: PETSC_INTERN PetscErrorCode VecSetValuesCOO_MPI(Vec, const PetscScalar[], InsertMode);

     84: PETSC_INTERN PetscErrorCode VecDot_MPI(Vec, Vec, PetscScalar *);
     85: PETSC_INTERN PetscErrorCode VecMDot_MPI(Vec, PetscInt, const Vec[], PetscScalar *);
     86: PETSC_INTERN PetscErrorCode VecTDot_MPI(Vec, Vec, PetscScalar *);
     87: PETSC_INTERN PetscErrorCode VecNorm_MPI(Vec, NormType, PetscReal *);
     88: PETSC_INTERN PetscErrorCode VecMax_MPI(Vec, PetscInt *, PetscReal *);
     89: PETSC_INTERN PetscErrorCode VecMin_MPI(Vec, PetscInt *, PetscReal *);
     90: PETSC_INTERN PetscErrorCode VecMaxPointwiseDivide_MPI(Vec, Vec, PetscReal *);
     91: PETSC_INTERN PetscErrorCode VecPlaceArray_MPI(Vec, const PetscScalar *);
     92: PETSC_INTERN PetscErrorCode VecResetArray_MPI(Vec);
     93: PETSC_INTERN PetscErrorCode VecCreate_MPI_Private(Vec, PetscBool, PetscInt, const PetscScalar[]);

     95: PETSC_SINGLE_LIBRARY_INTERN PetscErrorCode VecView_MPI(Vec, PetscViewer);
     96: PETSC_SINGLE_LIBRARY_INTERN PetscErrorCode VecDestroy_MPI(Vec);

     98: static inline PetscErrorCode VecMXDot_MPI_Default(Vec xin, PetscInt nv, const Vec y[], PetscScalar *z, PetscErrorCode (*VecMXDot_SeqFn)(Vec, PetscInt, const Vec[], PetscScalar *))
     99: {
    100:   PetscFunctionBegin;
    101:   PetscCall(VecMXDot_SeqFn(xin, nv, y, z));
    102:   PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, z, nv, MPIU_SCALAR, MPIU_SUM, PetscObjectComm((PetscObject)xin)));
    103:   PetscFunctionReturn(PETSC_SUCCESS);
    104: }

    106: static inline PetscErrorCode VecXDot_MPI_Default(Vec xin, Vec yin, PetscScalar *z, PetscErrorCode (*VecXDot_SeqFn)(Vec, Vec, PetscScalar *))
    107: {
    108:   PetscFunctionBegin;
    109:   PetscCall(VecXDot_SeqFn(xin, yin, z));
    110:   PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, z, 1, MPIU_SCALAR, MPIU_SUM, PetscObjectComm((PetscObject)xin)));
    111:   PetscFunctionReturn(PETSC_SUCCESS);
    112: }

    114: static inline PetscErrorCode VecMinMax_MPI_Default(Vec xin, PetscInt *idx, PetscReal *z, PetscErrorCode (*VecMinMax_SeqFn)(Vec, PetscInt *, PetscReal *), const MPI_Op ops[2])
    115: {
    116:   PetscFunctionBegin;
    117:   /* Find the local max */
    118:   PetscCall(VecMinMax_SeqFn(xin, idx, z));
    119:   if (PetscDefined(HAVE_MPIUNI)) PetscFunctionReturn(PETSC_SUCCESS);
    120:   /* Find the global max */
    121:   if (idx) {
    122:     struct {
    123:       PetscReal v;
    124:       PetscInt  i;
    125:     } in = {*z, *idx + xin->map->rstart};

    127:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &in, 1, MPIU_REAL_INT, ops[0], PetscObjectComm((PetscObject)xin)));
    128:     *z   = in.v;
    129:     *idx = in.i;
    130:   } else {
    131:     /* User does not need idx */
    132:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, z, 1, MPIU_REAL, ops[1], PetscObjectComm((PetscObject)xin)));
    133:   }
    134:   PetscFunctionReturn(PETSC_SUCCESS);
    135: }

    137: static inline PetscErrorCode VecDotNorm2_MPI_Default(Vec s, Vec t, PetscScalar *dp, PetscScalar *nm, PetscErrorCode (*VecDotNorm2_SeqFn)(Vec, Vec, PetscScalar *, PetscScalar *))
    138: {
    139:   PetscFunctionBegin;
    140:   PetscCall(VecDotNorm2_SeqFn(s, t, dp, nm));
    141:   {
    142:     PetscScalar sum[] = {*dp, *nm};

    144:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &sum, 2, MPIU_SCALAR, MPIU_SUM, PetscObjectComm((PetscObject)s)));
    145:     *dp = sum[0];
    146:     *nm = sum[1];
    147:   }
    148:   PetscFunctionReturn(PETSC_SUCCESS);
    149: }

    151: static inline PetscErrorCode VecNorm_MPI_Default(Vec xin, NormType type, PetscReal *z, PetscErrorCode (*VecNorm_SeqFn)(Vec, NormType, PetscReal *))
    152: {
    153:   PetscMPIInt zn = 1;
    154:   MPI_Op      op = MPIU_SUM;

    156:   PetscFunctionBegin;
    157:   PetscCall(VecNorm_SeqFn(xin, type, z));
    158:   switch (type) {
    159:   case NORM_1_AND_2:
    160:     // the 2 norm needs to be squared below before being summed. NORM_2 stores the norm in the
    161:     // first slot but while NORM_1_AND_2 stores it in the second
    162:     z[1] *= z[1];
    163:     zn = 2;
    164:     break;
    165:   case NORM_2:
    166:   case NORM_FROBENIUS:
    167:     z[0] *= z[0];
    168:   case NORM_1:
    169:     break;
    170:   case NORM_INFINITY:
    171:     op = MPIU_MAX;
    172:     break;
    173:   }
    174:   PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, z, zn, MPIU_REAL, op, PetscObjectComm((PetscObject)xin)));
    175:   if (type == NORM_2 || type == NORM_FROBENIUS || type == NORM_1_AND_2) z[type == NORM_1_AND_2] = PetscSqrtReal(z[type == NORM_1_AND_2]);
    176:   PetscFunctionReturn(PETSC_SUCCESS);
    177: }

    179: static inline PetscErrorCode VecErrorWeightedNorms_MPI_Default(Vec U, Vec Y, Vec E, NormType wnormtype, PetscReal atol, Vec vatol, PetscReal rtol, Vec vrtol, PetscReal ignore_max, PetscReal *norm, PetscInt *norm_loc, PetscReal *norma, PetscInt *norma_loc, PetscReal *normr, PetscInt *normr_loc, PetscErrorCode (*SeqFn)(Vec, Vec, Vec, NormType, PetscReal, Vec, PetscReal, Vec, PetscReal, PetscReal *, PetscInt *, PetscReal *, PetscInt *, PetscReal *, PetscInt *))
    180: {
    181:   PetscReal loc[6];

    183:   PetscFunctionBegin;
    184:   PetscCall(SeqFn(U, Y, E, wnormtype, atol, vatol, rtol, vrtol, ignore_max, norm, norm_loc, norma, norma_loc, normr, normr_loc));
    185:   if (wnormtype == NORM_2) {
    186:     loc[0] = PetscSqr(*norm);
    187:     loc[1] = PetscSqr(*norma);
    188:     loc[2] = PetscSqr(*normr);
    189:   } else {
    190:     loc[0] = *norm;
    191:     loc[1] = *norma;
    192:     loc[2] = *normr;
    193:   }
    194:   loc[3] = (PetscReal)*norm_loc;
    195:   loc[4] = (PetscReal)*norma_loc;
    196:   loc[5] = (PetscReal)*normr_loc;
    197:   if (wnormtype == NORM_2) {
    198:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, loc, 6, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)U)));
    199:   } else {
    200:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, loc, 3, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)U)));
    201:     PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, loc + 3, 3, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)U)));
    202:   }
    203:   if (wnormtype == NORM_2) {
    204:     *norm  = PetscSqrtReal(loc[0]);
    205:     *norma = PetscSqrtReal(loc[1]);
    206:     *normr = PetscSqrtReal(loc[2]);
    207:   } else {
    208:     *norm  = loc[0];
    209:     *norma = loc[1];
    210:     *normr = loc[2];
    211:   }
    212:   *norm_loc  = loc[3];
    213:   *norma_loc = loc[4];
    214:   *normr_loc = loc[5];
    215:   PetscFunctionReturn(PETSC_SUCCESS);
    216: }