Actual source code: sfmpi.c

      1: #include <../src/vec/is/sf/impls/basic/sfpack.h>

      3: // Though there is no default mechanism to start a communication, we have a
      4: // default to finish communication, which is just waiting on the requests.
      5: // It should work for both non-blocking or persistent send/recvs or collectivwes.
      6: static PetscErrorCode PetscSFLinkFinishCommunication_Default(PetscSF sf, PetscSFLink link, PetscSFDirection direction)
      7: {
      8:   PetscSF_Basic     *bas           = (PetscSF_Basic *)sf->data;
      9:   const PetscMemType rootmtype_mpi = link->rootmtype_mpi, leafmtype_mpi = link->leafmtype_mpi;
     10:   const PetscInt     rootdirect_mpi = link->rootdirect_mpi, leafdirect_mpi = link->leafdirect_mpi;

     12:   PetscFunctionBegin;
     13:   if (sf->monitor) {
     14:     PetscMPIInt rank;
     15:     const char *rootaction = (direction == PETSCSF_ROOT2LEAF) ? "sending to  " : "recving from";
     16:     const char *leafaction = (direction == PETSCSF_ROOT2LEAF) ? "recving from" : "sending to  ";
     17:     const char *sfaction   = (direction == PETSCSF_ROOT2LEAF) ? "PetscSFBcast" : "PetscSFReduce";

     19:     PetscCall(PetscPrintf(PETSC_COMM_SELF, "---------------- Begin %s communication -------------------\n", sfaction));
     20:     PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)sf), &rank));

     22:     for (PetscMPIInt i = 0; i < bas->nrootreqs; i++) {
     23:       size_t size = (bas->ioffset[i + bas->ndiranks + 1] - bas->ioffset[i + bas->ndiranks]) * link->unitbytes;
     24:       PetscCall(PetscPrintf(PETSC_COMM_SELF, "Rank %6d %s Rank %6d (%16zu bytes) with MPI tag %10d ... ", rank, rootaction, bas->iranks[i + bas->ndiranks], size, link->tag));
     25:       PetscCallMPI(MPI_Wait(link->rootreqs[direction][rootmtype_mpi][rootdirect_mpi] + i, MPI_STATUS_IGNORE));
     26:       PetscCall(PetscPrintf(PETSC_COMM_SELF, "DONE\n"));
     27:     }
     28:     for (PetscMPIInt i = 0; i < sf->nleafreqs; i++) {
     29:       size_t size = (sf->roffset[i + sf->ndranks + 1] - sf->roffset[i + sf->ndranks]) * link->unitbytes;
     30:       PetscCall(PetscPrintf(PETSC_COMM_SELF, "Rank %6d %s Rank %6d (%16zu bytes) with MPI tag %10d ... ", rank, leafaction, sf->ranks[i + sf->ndranks], size, link->tag));
     31:       PetscCallMPI(MPI_Wait(link->leafreqs[direction][leafmtype_mpi][leafdirect_mpi] + i, MPI_STATUS_IGNORE));
     32:       PetscCall(PetscPrintf(PETSC_COMM_SELF, "DONE\n"));
     33:     }
     34:     PetscCall(PetscPrintf(PETSC_COMM_SELF, "---------------- End   %s communication -------------------\n\n", sfaction));
     35:   } else {
     36:     if (bas->nrootreqs) PetscCallMPI(MPI_Waitall(bas->nrootreqs, link->rootreqs[direction][rootmtype_mpi][rootdirect_mpi], MPI_STATUSES_IGNORE));
     37:     if (sf->nleafreqs) PetscCallMPI(MPI_Waitall(sf->nleafreqs, link->leafreqs[direction][leafmtype_mpi][leafdirect_mpi], MPI_STATUSES_IGNORE));
     38:   }

     40:   if (direction == PETSCSF_ROOT2LEAF) {
     41:     PetscCall(PetscSFLinkCopyLeafBufferInCaseNotUseGpuAwareMPI(sf, link, PETSC_FALSE /* host2device after recving */));
     42:   } else {
     43:     PetscCall(PetscSFLinkCopyRootBufferInCaseNotUseGpuAwareMPI(sf, link, PETSC_FALSE));
     44:   }
     45:   PetscFunctionReturn(PETSC_SUCCESS);
     46: }

     48: /*
     49:    The routine Creates a communication link for the given operation. It first looks up its link cache. If
     50:    there is a free & suitable one, it uses it. Otherwise it creates a new one.

     52:    A link contains buffers and MPI requests for send/recv. It also contains pack/unpack routines to pack/unpack
     53:    root/leafdata to/from these buffers. Buffers are allocated at our discretion. When we find root/leafata
     54:    can be directly passed to MPI, we won't allocate them. Even we allocate buffers, we only allocate
     55:    those that are needed by the given `sfop` and `op`, in other words, we do lazy memory-allocation.

     57:    The routine also allocates buffers on CPU when one does not use gpu-aware MPI but data is on GPU.

     59:    In SFBasic, MPI requests are persistent. They are init'ed until we try to get requests from a link.

     61:    The routine is shared by SFBasic and SFNeighbor based on the fact they all deal with sparse graphs and
     62:    need pack/unpack data.
     63: */
     64: PetscErrorCode PetscSFLinkCreate_MPI(PetscSF sf, MPI_Datatype unit, PetscMemType xrootmtype, const void *rootdata, PetscMemType xleafmtype, const void *leafdata, MPI_Op op, PetscSFOperation sfop, PetscSFLink *mylink)
     65: {
     66:   PetscSF_Basic   *bas = (PetscSF_Basic *)sf->data;
     67:   PetscInt         i, j, k, nrootreqs, nleafreqs, nreqs;
     68:   PetscSFLink     *p, link;
     69:   PetscSFDirection direction;
     70:   MPI_Request     *reqs = NULL;
     71:   PetscBool        match, rootdirect[2], leafdirect[2];
     72:   PetscMemType     rootmtype = PetscMemTypeHost(xrootmtype) ? PETSC_MEMTYPE_HOST : PETSC_MEMTYPE_DEVICE; /* Convert to 0/1 as we will use it in subscript */
     73:   PetscMemType     leafmtype = PetscMemTypeHost(xleafmtype) ? PETSC_MEMTYPE_HOST : PETSC_MEMTYPE_DEVICE;
     74:   PetscMemType     rootmtype_mpi, leafmtype_mpi;   /* mtypes seen by MPI */
     75:   PetscInt         rootdirect_mpi, leafdirect_mpi; /* root/leafdirect seen by MPI*/

     77:   PetscFunctionBegin;
     78:   /* Can we directly use root/leafdirect with the given sf, sfop and op? */
     79:   for (i = PETSCSF_LOCAL; i <= PETSCSF_REMOTE; i++) {
     80:     if (sfop == PETSCSF_BCAST) {
     81:       rootdirect[i] = bas->rootcontig[i];                                                  /* Pack roots */
     82:       leafdirect[i] = (sf->leafcontig[i] && op == MPI_REPLACE) ? PETSC_TRUE : PETSC_FALSE; /* Unpack leaves */
     83:     } else if (sfop == PETSCSF_REDUCE) {
     84:       leafdirect[i] = sf->leafcontig[i];                                                    /* Pack leaves */
     85:       rootdirect[i] = (bas->rootcontig[i] && op == MPI_REPLACE) ? PETSC_TRUE : PETSC_FALSE; /* Unpack roots */
     86:     } else {                                                                                /* PETSCSF_FETCH */
     87:       rootdirect[i] = PETSC_FALSE;                                                          /* FETCH always need a separate rootbuf */
     88:       leafdirect[i] = PETSC_FALSE;                                                          /* We also force allocating a separate leafbuf so that leafdata and leafupdate can share mpi requests */
     89:     }
     90:   }

     92:   // NEVER use root/leafdirect[] for persistent collectives. Otherwise, suppose for the first time, all ranks build
     93:   // a persistent MPI request in a collective call. Then in a second call to PetscSFBcast, one rank uses root/leafdirect
     94:   // but with new rootdata/leafdata pointers. Other ranks keep using the same rootdata/leafdata pointers as last time.
     95:   // Only that rank will try to rebuild the request with a collective call, resulting in hanging. We could to call
     96:   // MPI_Allreduce() every time to detect changes in root/leafdata, but that is too expensive for sparse communication.
     97:   // So we always set root/leafdirect[] to false and allocate additional root/leaf buffers for persistent collectives.
     98:   if (sf->persistent && sf->collective) {
     99:     rootdirect[PETSCSF_REMOTE] = PETSC_FALSE;
    100:     leafdirect[PETSCSF_REMOTE] = PETSC_FALSE;
    101:   }

    103:   if (sf->use_gpu_aware_mpi) {
    104:     rootmtype_mpi = rootmtype;
    105:     leafmtype_mpi = leafmtype;
    106:   } else {
    107:     rootmtype_mpi = leafmtype_mpi = PETSC_MEMTYPE_HOST;
    108:   }
    109:   /* Will root/leafdata be directly accessed by MPI?  Without use_gpu_aware_mpi, device data is buffered on host and then passed to MPI */
    110:   rootdirect_mpi = rootdirect[PETSCSF_REMOTE] && (rootmtype_mpi == rootmtype) ? 1 : 0;
    111:   leafdirect_mpi = leafdirect[PETSCSF_REMOTE] && (leafmtype_mpi == leafmtype) ? 1 : 0;

    113:   direction = (sfop == PETSCSF_BCAST) ? PETSCSF_ROOT2LEAF : PETSCSF_LEAF2ROOT;
    114:   nrootreqs = bas->nrootreqs;
    115:   nleafreqs = sf->nleafreqs;

    117:   /* Look for free links in cache */
    118:   for (p = &bas->avail; (link = *p); p = &link->next) {
    119:     if (!link->use_nvshmem) { /* Only check with MPI links */
    120:       PetscCall(MPIPetsc_Type_compare(unit, link->unit, &match));
    121:       if (match) {
    122:         /* If root/leafdata will be directly passed to MPI, test if the data used to initialized the MPI requests matches with the current.
    123:            If not, free old requests. New requests will be lazily init'ed until one calls PetscSFLinkGetMPIBuffersAndRequests() with the same tag.
    124:         */
    125:         if (rootdirect_mpi && sf->persistent && link->rootreqsinited[direction][rootmtype][1] && link->rootdatadirect[direction][rootmtype] != rootdata) {
    126:           reqs = link->rootreqs[direction][rootmtype][1]; /* Here, rootmtype = rootmtype_mpi */
    127:           for (i = 0; i < nrootreqs; i++) {
    128:             if (reqs[i] != MPI_REQUEST_NULL) PetscCallMPI(MPI_Request_free(&reqs[i]));
    129:           }
    130:           link->rootreqsinited[direction][rootmtype][1] = PETSC_FALSE;
    131:         }
    132:         if (leafdirect_mpi && sf->persistent && link->leafreqsinited[direction][leafmtype][1] && link->leafdatadirect[direction][leafmtype] != leafdata) {
    133:           reqs = link->leafreqs[direction][leafmtype][1];
    134:           for (i = 0; i < nleafreqs; i++) {
    135:             if (reqs[i] != MPI_REQUEST_NULL) PetscCallMPI(MPI_Request_free(&reqs[i]));
    136:           }
    137:           link->leafreqsinited[direction][leafmtype][1] = PETSC_FALSE;
    138:         }
    139:         *p = link->next; /* Remove from available list */
    140:         goto found;
    141:       }
    142:     }
    143:   }

    145:   PetscCall(PetscNew(&link));
    146:   PetscCall(PetscSFLinkSetUp_Host(sf, link, unit));
    147:   PetscCall(PetscCommGetNewTag(PetscObjectComm((PetscObject)sf), &link->tag)); /* One tag per link */

    149:   nreqs = (nrootreqs + nleafreqs) * 8;
    150:   PetscCall(PetscMalloc1(nreqs, &link->reqs));
    151:   for (i = 0; i < nreqs; i++) link->reqs[i] = MPI_REQUEST_NULL; /* Initialized to NULL so that we know which need to be freed in Destroy */

    153:   if (nreqs)
    154:     for (i = 0; i < 2; i++) {     /* Two communication directions */
    155:       for (j = 0; j < 2; j++) {   /* Two memory types */
    156:         for (k = 0; k < 2; k++) { /* root/leafdirect 0 or 1 */
    157:           link->rootreqs[i][j][k] = link->reqs + nrootreqs * (4 * i + 2 * j + k);
    158:           link->leafreqs[i][j][k] = link->reqs + nrootreqs * 8 + nleafreqs * (4 * i + 2 * j + k);
    159:         }
    160:       }
    161:     }

    163:   link->FinishCommunication = PetscSFLinkFinishCommunication_Default;
    164:   // each SF type could customize their communication by setting function pointers in the link.
    165:   // Currently only BASIC and NEIGHBOR use this abstraction.
    166:   PetscTryTypeMethod(sf, SetCommunicationOps, link);

    168: found:

    170: #if defined(PETSC_HAVE_DEVICE)
    171:   if ((PetscMemTypeDevice(xrootmtype) || PetscMemTypeDevice(xleafmtype)) && !link->deviceinited) {
    172:   #if defined(PETSC_HAVE_CUDA)
    173:     if (sf->backend == PETSCSF_BACKEND_CUDA) PetscCall(PetscSFLinkSetUp_CUDA(sf, link, unit)); /* Setup streams etc */
    174:   #endif
    175:   #if defined(PETSC_HAVE_HIP)
    176:     if (sf->backend == PETSCSF_BACKEND_HIP) PetscCall(PetscSFLinkSetUp_HIP(sf, link, unit)); /* Setup streams etc */
    177:   #endif
    178:   #if defined(PETSC_HAVE_KOKKOS)
    179:     if (sf->backend == PETSCSF_BACKEND_KOKKOS) PetscCall(PetscSFLinkSetUp_Kokkos(sf, link, unit));
    180:   #endif
    181:   }
    182: #endif

    184:   /* Allocate buffers along root/leafdata */
    185:   for (i = PETSCSF_LOCAL; i <= PETSCSF_REMOTE; i++) {
    186:     /* For local communication, buffers are only needed when roots and leaves have different mtypes */
    187:     if (i == PETSCSF_LOCAL && rootmtype == leafmtype) continue;
    188:     if (bas->rootbuflen[i]) {
    189:       if (rootdirect[i]) { /* Aha, we disguise rootdata as rootbuf */
    190:         link->rootbuf[i][rootmtype] = (char *)rootdata + bas->rootstart[i] * link->unitbytes;
    191:       } else { /* Have to have a separate rootbuf */
    192:         if (!link->rootbuf_alloc[i][rootmtype]) PetscCall(PetscSFMalloc(sf, rootmtype, bas->rootbuflen[i] * link->unitbytes, (void **)&link->rootbuf_alloc[i][rootmtype]));
    193:         link->rootbuf[i][rootmtype] = link->rootbuf_alloc[i][rootmtype];
    194:       }
    195:     }

    197:     if (sf->leafbuflen[i]) {
    198:       if (leafdirect[i]) {
    199:         link->leafbuf[i][leafmtype] = (char *)leafdata + sf->leafstart[i] * link->unitbytes;
    200:       } else {
    201:         if (!link->leafbuf_alloc[i][leafmtype]) PetscCall(PetscSFMalloc(sf, leafmtype, sf->leafbuflen[i] * link->unitbytes, (void **)&link->leafbuf_alloc[i][leafmtype]));
    202:         link->leafbuf[i][leafmtype] = link->leafbuf_alloc[i][leafmtype];
    203:       }
    204:     }
    205:   }

    207: #if defined(PETSC_HAVE_DEVICE)
    208:   /* Allocate buffers on host for buffering data on device in cast not use_gpu_aware_mpi */
    209:   if (PetscMemTypeDevice(rootmtype) && PetscMemTypeHost(rootmtype_mpi)) {
    210:     if (!link->rootbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST]) PetscCall(PetscMalloc(bas->rootbuflen[PETSCSF_REMOTE] * link->unitbytes, &link->rootbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST]));
    211:     link->rootbuf[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST] = link->rootbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST];
    212:   }
    213:   if (PetscMemTypeDevice(leafmtype) && PetscMemTypeHost(leafmtype_mpi)) {
    214:     if (!link->leafbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST]) PetscCall(PetscMalloc(sf->leafbuflen[PETSCSF_REMOTE] * link->unitbytes, &link->leafbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST]));
    215:     link->leafbuf[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST] = link->leafbuf_alloc[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST];
    216:   }
    217: #endif

    219:   /* Set `current` state of the link. They may change between different SF invocations with the same link */
    220:   if (sf->persistent) { /* If data is directly passed to MPI and inits MPI requests, record the data for comparison on future invocations */
    221:     if (rootdirect_mpi) link->rootdatadirect[direction][rootmtype] = rootdata;
    222:     if (leafdirect_mpi) link->leafdatadirect[direction][leafmtype] = leafdata;
    223:   }

    225:   link->rootdata = rootdata; /* root/leafdata are keys to look up links in PetscSFXxxEnd */
    226:   link->leafdata = leafdata;
    227:   for (i = PETSCSF_LOCAL; i <= PETSCSF_REMOTE; i++) {
    228:     link->rootdirect[i] = rootdirect[i];
    229:     link->leafdirect[i] = leafdirect[i];
    230:   }
    231:   link->rootdirect_mpi = rootdirect_mpi;
    232:   link->leafdirect_mpi = leafdirect_mpi;
    233:   link->rootmtype      = rootmtype;
    234:   link->leafmtype      = leafmtype;
    235:   link->rootmtype_mpi  = rootmtype_mpi;
    236:   link->leafmtype_mpi  = leafmtype_mpi;

    238:   link->next = bas->inuse;
    239:   bas->inuse = link;
    240:   *mylink    = link;
    241:   PetscFunctionReturn(PETSC_SUCCESS);
    242: }